Pinned Repositories
advanced_python_2019
Advanced Python Course 2019 - MoBi - Heidelberg
anndata
Annotated data.
biovizBase
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/biovizBase.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=biovizBase.
BTM_reproducible_research
Material for the reproducible research session of the BTM in Heidelberg 2019
dash-sample-apps
Apps hosted in the Python Dash Gallery
DnaFeaturesViewer
:eye: Python library to plot DNA sequence features (e.g. from Genbank files)
emacs_setup
Setup of my emacs in Evil mode
GATKVarCallPipeline
ggbio
Grid and ggplot2 based visualization for biological data
RNAseqToCustomFASTA
Produce custom protein fasta databases from RNAseq data
mffrank's Repositories
mffrank/GATKVarCallPipeline
mffrank/RNAseqToCustomFASTA
Produce custom protein fasta databases from RNAseq data
mffrank/advanced_python_2019
Advanced Python Course 2019 - MoBi - Heidelberg
mffrank/anndata
Annotated data.
mffrank/biovizBase
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/biovizBase.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=biovizBase.
mffrank/BTM_reproducible_research
Material for the reproducible research session of the BTM in Heidelberg 2019
mffrank/dash-sample-apps
Apps hosted in the Python Dash Gallery
mffrank/DnaFeaturesViewer
:eye: Python library to plot DNA sequence features (e.g. from Genbank files)
mffrank/emacs_setup
Setup of my emacs in Evil mode
mffrank/ggbio
Grid and ggplot2 based visualization for biological data
mffrank/gitignore
A collection of useful .gitignore templates
mffrank/gpmeth
Model single-cell epigenetics in continuous processes
mffrank/mffrank.github.io
Personal website
mffrank/mudata
Multimodal Data (.h5mu) implementation for Python
mffrank/OpenMS
The codebase of the OpenMS project
mffrank/PDC2022Stegle
Code for the stegle predoc module 2022
mffrank/PeptideAligner
An R package to align peptides to the genome
mffrank/pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
mffrank/rMATS
Changes to make rMATS Accept sorted bam files
mffrank/RNAseqPipeline
mffrank/scNMT_tools
Convenience functions and data handling stuff for scNMT in python
mffrank/SEC_annotator
manual annotation of SEC features
mffrank/SEC_tracepicker
Pick individual traces belonging to a protein or complex feature
mffrank/SECprofiler
mffrank/SmfR
mffrank/smk_wgbs
mffrank/srmcollider
Computes interferences in SRM (Selected Reaction Monitoring) experiments.