mgalland
Principal Investigator@INRAE Rennes. Plant and Data Scientist. Affinity for plant genomics and machine learning.
INRAERennes
Pinned Repositories
2019-02-05-wageningen-genomics
AstrobioMike
basemap
Jupyter notebook to plot geographical datasets using basemap
biodataservices
BioData Services corporate website
ChIP-seq-analysis
ChIP-seq analysis notes from Tommy Tang
docker-for-teaching
funannotate
A genome annotation pipeline based on funannotate: Snakemake pipeline + Docker image
gviz
Scripts to plot NGS data on genomic coordinates
mgalland.github.io
My personal website
snakemake-example
RNA-Seq Snakemake example with Jekyll homepage creation
mgalland's Repositories
mgalland/docker-for-teaching
mgalland/funannotate
A genome annotation pipeline based on funannotate: Snakemake pipeline + Docker image
mgalland/gviz
Scripts to plot NGS data on genomic coordinates
mgalland/2019-02-05-wageningen-genomics
mgalland/AstrobioMike
mgalland/basemap
Jupyter notebook to plot geographical datasets using basemap
mgalland/biodataservices
BioData Services corporate website
mgalland/clusterProfiler
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
mgalland/mgalland.github.io
My personal website
mgalland/freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
mgalland/github_publication_template
A template to generate a GitHub template for a scientific publication. Contains sub-folders for figures, sub-folders for tables, a README file with the figure list, etc.
mgalland/how-many-reads
Analyses related to RNA-seq experimental design: how many reads per sample, power, etc.
mgalland/learning_docker
Getting started with Docker
mgalland/me_and_myself
A repository to demonstrate collaboration with one person (yourself)
mgalland/me_and_myself_and_I
A demo to show how to collaborate with oneself through RStudio, git and GitHub
mgalland/Metabarcoding
Metabarcoding Pipeline
mgalland/mgalland
mgalland/MicrobiotaProcess
mgalland/mlr3_sandbox
test
mgalland/mmjulkowska.github.io
roots - forward genetics - big data analysis - r coding
mgalland/my-first-binder
binder workshop
mgalland/nf-gwas-pipeline
A Nextflow Genome-Wide Association Study (GWAS) Pipeline
mgalland/ohi-data-science-training
mgalland/promoter_conservation
A repository containing scripts and files necessary to analyse conservation at protein binding sites
mgalland/r-qtl2-analysis
mgalland/rice-germination
Rice germination paper for Frontiers in Plant Science (Seed Proteomics).
mgalland/swc_template_import
mgalland/tidyr
Easily tidy data with spread and gather functions.
mgalland/wood_ducks
A project about ducks in Limburg eating Ingrid's grass
mgalland/zalando-howto-open-source
Open Source guidance from Zalando, Europe's largest online fashion platform