mhorlacher
Bioinformatics PhD Student @ TUM and ICB (Helmholtz Center). Broad interest in statistics, machine-and deep-learning, software development and biology.
Helmholtz Center Munich
Pinned Repositories
Benchmark-RBP
bioio
CoolBox
Jupyter notebook based genomic data visualization toolkit.
datastructures
Implementations of various datastructures
igrads
A Tensorflow 2.x implementation of the explainable AI method 'Integrated Gradients'.
kafka-connect-jdbc
Kafka Connect JDBC Docker Image.
metamotif
Generate consensus sequence motifs from (arbitrary) sequence importance scores.
rbpnet
StreamFork
A small library for streaming data to a number of connecting clients
mhorlacher's Repositories
mhorlacher/rbpnet
mhorlacher/Benchmark-RBP
mhorlacher/igrads
A Tensorflow 2.x implementation of the explainable AI method 'Integrated Gradients'.
mhorlacher/metamotif
Generate consensus sequence motifs from (arbitrary) sequence importance scores.
mhorlacher/bioio
mhorlacher/CoolBox
Jupyter notebook based genomic data visualization toolkit.
mhorlacher/datastructures
Implementations of various datastructures
mhorlacher/docker-pile
A collection of dockerized software for Data Science
mhorlacher/kafka-connect-jdbc
Kafka Connect JDBC Docker Image.
mhorlacher/sc2rbpmap
mhorlacher/StreamFork
A small library for streaming data to a number of connecting clients
mhorlacher/jpegMedian
Extracts the background image from a sequence of stationary images (JPEG)
mhorlacher/BEND
Benchmarking DNA Language Models on Biologically Meaningful Tasks
mhorlacher/bioinformatics
mhorlacher/BioPhi
BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
mhorlacher/gin-config
Gin provides a lightweight configuration framework for Python
mhorlacher/ImmuneBuilder
Predict the structure of immune receptor proteins
mhorlacher/mdtraj
An open library for the analysis of molecular dynamics trajectories
mhorlacher/mhorlacher.github.io
Forward from mhorlacher.github.io to marchorlacher.com
mhorlacher/milatools
Tools to connect to and interact with the Mila (and other) clusters
mhorlacher/ngs-scripts
Various small Scripts for NGS Data Analysis
mhorlacher/pyutils
Utilities for the Python language
mhorlacher/scripts
mhorlacher/SimpleProxy
mhorlacher/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
mhorlacher/tensorflow_datasets
TFDS is a collection of datasets ready to use with TensorFlow, Jax, ...