michael-conway/irods-ga4gh-dos

GA4GH Data Object Service for iRODS

iDRS - GA4GH Data Repository Service for iRODS

iDR - GA4GH Data Repository Service for iRODS

Table of Contents

• Introduction
• Features
• Requirements
• Building
• Testing
• API

Introduction

This is a partial implementation of a new REST API for iRODS based on the Jargon libraries, whose primary function is to provide tokens (JWTs) and provide file transfer for iRODS files.

Features

Requirements

The application can be run locally or in a docker container, the requirements for each setup are listed below.

Local

Docker

Run Local

Run Docker Compose

Building

This is a Spring Boot application written in the Java language. iDRS utilizes the Jargon libraries (https://github.com/DICE-UNC/jargon) as a 'zero install' client. Maven is used as the build environment.

Testing

JUnit testing of the components of the DRS iRODS implementation follow the approach of the underlying Jargon libraries. See this general guide: https://github.com/DICE-UNC/jargon/blob/master/docker-test-framework/DOCKERTEST.md