Pinned Repositories
denovogear
A program to detect denovo-variants using next-generation sequencing data. (http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html)
GDCRNATools
GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC
genstats
Statistics course for JHU Genomic Data Science Sequence
MutantGene
A Python library that serves to link genes that suffered some type of mutation, detected from neoplasm samples and stored in MAF files, to their Gene Ontology terms. This is a tool to help researchers understand the impact of each mutation on the neoplasm phenotype.
pRRophetic
R package
TCGAnalyzeR
TCGAnalyzeR which is an R Shiny based web application enables an integrated analysis of genomic, transcriptomic and clinical data 33 cancer types in TCGA projects; 123 pre-computed pan-cancer cohorts (MSI-H, Immune, PAM50, Triple Negative, IDH1 etc).
michwoz's Repositories
michwoz/denovogear
A program to detect denovo-variants using next-generation sequencing data. (http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html)
michwoz/GDCRNATools
GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC
michwoz/genstats
Statistics course for JHU Genomic Data Science Sequence
michwoz/MutantGene
A Python library that serves to link genes that suffered some type of mutation, detected from neoplasm samples and stored in MAF files, to their Gene Ontology terms. This is a tool to help researchers understand the impact of each mutation on the neoplasm phenotype.
michwoz/pRRophetic
R package
michwoz/TCGAnalyzeR
TCGAnalyzeR which is an R Shiny based web application enables an integrated analysis of genomic, transcriptomic and clinical data 33 cancer types in TCGA projects; 123 pre-computed pan-cancer cohorts (MSI-H, Immune, PAM50, Triple Negative, IDH1 etc).