align section composition and ordering with @mslarae13's Example Use tab

[turbomam]

• from SNTC to LinkML
  • slots within the soil_biosample class in the annotated soil biosample YAML file
  • slot/column sections as LinkML annotations
  • slot/column order as LinkML annotations
  • section definitions and section ordering in LInkML ???
• from LinkML to DH data.tsv

Implement within linkml_to_dh_light.py for the nmdc_biosample_slots and mixs_packages_x_slots tabs

implement within inject_supplementary for all other tabs

[turbomam]

Trying to write a clearer specification

• Implement in linkml_round_trips/modular_gd.py
• Write tests for this?

Background:

• DataHarmonizer columns are grouped into sections
• @mslarae13 knows
  • what the sections should be called
  • how the sections should be ordered left to right
  • which columns should appear in each section
  • how the columns should be ordered left to right within the sections
• Each tab in Soil-NMDC-Template_Compiled that defines columns to appear in DH should
  • be tagged as input for soil DH template generation in tabSheetIdentification
  • have a column called section
• There should be a tab called Sections_order that lists the section names with their orders, using columns named order and section
• the values in Sections_order.section must match the section column values found in and tab that is declared input for soil DH template generation in tabSheetIdentification
  • all Sections_order.section values must match at least one section column value in a input for soil DH template generation tab
  • all section column values in input for soil DH template generation tabs must match one of the Sections_order.section values

It is assumed that the section names and orders will remain the same for all NMDC DH templates.