microbiomedata/metaT_Assembly

workflow for metatranscriptome assembly

The Metatranscriptome Assembly Pipeline

Summary

This workflow is developed by Brian Foster at JGI. Original repo can be found (here)[https://code.jgi.doe.gov/BFoster/jgi_meta_wdl/-/tree/master/metatranscriptome].

Running Workflow in Cromwell

The Docker image and Dockerfile can be found here

Input files

Output files