MIDAS Network

The MIDAS Network is funded by the National Institute of General Medical Sciences to study infectious diseases using computational methods

United States of America

Pinned Repositories

COVID-19
2019 novel coronavirus repository
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covid19-scenario-modeling-hub
COVID-19 Scenario Modeling Hub
Language:Python67 5 046
covid19-smh-research
COVID-19 Scenario Modeling Hub - Research
Language:R4 5 08
ebola-public
Language:PHP6 8 82
flu-scenario-modeling-hub
Flu Scenario Modeling Hub
Language:R11 8 026
flu-scenario-modeling-hub_resources
Language:R10 7 02
HPC
Documentation for the MIDAS Coordination Center's High Performance Computing Platform
2 6 00
midas-student-repo
This repository is for sharing any resources you find useful in your studies, whether that be code, literature, or other materials that you feel would contribute to our group. Please help us build this into a useful environment for those studying infectious disease modeling to help one another learn!
6 6 02
rsv-scenario-modeling-hub
RSV Scenario Modeling Hub
Language:R10 7 220
SMHvalidation
Language:R5 5 230

MIDAS Network's Repositories

midas-network/covid19-scenario-modeling-hub
COVID-19 Scenario Modeling Hub
Language:Python67 5 046
midas-network/flu-scenario-modeling-hub
Flu Scenario Modeling Hub
Language:R11 8 026
midas-network/flu-scenario-modeling-hub_resources
Language:R10 7 02
midas-network/rsv-scenario-modeling-hub
RSV Scenario Modeling Hub
Language:R10 7 220
midas-network/SMHvalidation
Language:R5 5 230
midas-network/covid19-smh-research
COVID-19 Scenario Modeling Hub - Research
Language:R4 5 08
midas-network/midas-data
An ontology for MIDAS data types
Language:Jupyter Notebook2 6 624
midas-network/bayesian-covid-model-demo
Bayesian modeling of COVID-19
Language:Jupyter Notebook1 1 0
midas-network/cknowledge-covid-model
Bayesian modeling of COVID-19
Language:Jupyter Notebook1 1 01
midas-network/covid19-smh-research_resources
COVID-19 Scenario Modeling Hub Research - Resources
Language:R1 4 1
midas-network/cromwell-multi-model-demo
This project demonstrates running multiple models using Cromwell, Python or R, and Docker.
Language:WDL1 4 00
midas-network/SMHviz_plot
Python librairy for the US Scenario Modeling Hub (SMH) plots
Language:Python1 5 101
midas-network/cromwell-bayesian-model-covid-demo
Language:Shell0 4 10
midas-network/cromwell-epispot
This project demostrates running Epispot using Cromwell, Python, and Docker.
Language:Shell0 4 00
midas-network/covid19-scenario-hub_evaluation
Language:R4 01
midas-network/cromwell-demo
Language:R6 01
midas-network/cromwell-reproducibility-demo
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midas-network/cromwell-SEIR-basic
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midas-network/cromwell_flepimop_project
Project repository for Cromwell encapsulation of FlepiMoP
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midas-network/example_round-scenariohub
Language:R3 12
midas-network/jaxlib-0.1.62
5 0
midas-network/midas-discover-webservice
A Flask webservice to provide data for midas visualization
Language:Python5 0
midas-network/midas-visualization-data-zipper
5 0
midas-network/research-clustering
Language:Python3 0
midas-network/ScenarioModelingHub.plot
Language:R5 1
midas-network/ScenarioModelingHub.shiny
Language:R5 0
midas-network/scraping-analysis
Analysis of file name metadta from the MIDAS Curated Archive of Global Public Health Data
Language:Jupyter Notebook4 0
midas-network/SMHviz_layout
Python librairy for the Scenario Modeling Hub (SMH) websites layout pages
Language:Python4 5
midas-network/term-extraction
Language:Python4 0
midas-network/tycho_national_incidence
Language:JavaScript5 0