Pinned Repositories
analysis-tools
Code for analyzing data saved by the Open Ephys GUI
Cinder
Cinder is a community-developed, free and open source library for professional-quality creative coding in C++.
cookbook-2nd-code
Code of the IPython Cookbook, Second Edition, by Cyrille Rossant, Packt Publishing 2018 [read-only repository]
cusignal
cuSignal - RAPIDS Signal Processing Library
DABEST-python
Data Analysis with Bootstrapped ESTimation
ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
ephys2plx
Here are some Matlab .m files and a Matlab mex function used to convert Open Ephys data files to the Plexon .plx file, which can be opened by Plexon Offline-Sorter.
example
Example showing how to run the KlustaSuite on a raw dataset.
GUI
Software for electrophysiology data acquisition
pyecog
For classifying single channel ECoG recordings (iEEG)
mikailweston's Repositories
mikailweston/analysis-tools
Code for analyzing data saved by the Open Ephys GUI
mikailweston/Cinder
Cinder is a community-developed, free and open source library for professional-quality creative coding in C++.
mikailweston/cookbook-2nd-code
Code of the IPython Cookbook, Second Edition, by Cyrille Rossant, Packt Publishing 2018 [read-only repository]
mikailweston/cusignal
cuSignal - RAPIDS Signal Processing Library
mikailweston/DABEST-python
Data Analysis with Bootstrapped ESTimation
mikailweston/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
mikailweston/ephys2plx
Here are some Matlab .m files and a Matlab mex function used to convert Open Ephys data files to the Plexon .plx file, which can be opened by Plexon Offline-Sorter.
mikailweston/example
Example showing how to run the KlustaSuite on a raw dataset.
mikailweston/GUI
Software for electrophysiology data acquisition
mikailweston/pyecog
For classifying single channel ECoG recordings (iEEG)
mikailweston/headstage
32-channel headstage based on the Intan RHD2132 chip
mikailweston/JUCE
The JUCE cross-platform C++ framework.
mikailweston/Kilosort3
Fast spike sorting with drift correction for up to a thousand channels
mikailweston/klustakwik
Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures. (Can also be used in "classical" mode for standard hard EM algorithm).
mikailweston/klustakwik2
Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures
mikailweston/klustaviewa
GUI for spike sorting manual stage in Python
mikailweston/kwiklib
Shared features between the projects (files, statistics, utils...)
mikailweston/Mytest
mikailweston/npy-matlab
Experimental code to read/write NumPy .NPY files in MATLAB
mikailweston/phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
mikailweston/phyui
mikailweston/pynacollada
pynapple collaborative data analysis (high level python scripts) :tropical_drink:
mikailweston/rhythm
Intan Technologies Rhythm Verilog HDL code
mikailweston/scientific-python-lectures
Lectures on scientific computing with python, as IPython notebooks.
mikailweston/sglxarray
Utilities for loading SpikeGLX data in xarray format.
mikailweston/simpleclust
Manual spike clustering software for matlab
mikailweston/spikedetekt
Electrophysiological spike detection for large dense electrode arrays
mikailweston/spikedetekt2
mikailweston/SpikeGLX
HHMI Neural Recording System
mikailweston/ucl-latex-thesis-templates
UCL LaTeX thesis templates.