Compile, Run and visualise results for the Orszag-Tang Test
cd src
cp vacusr.t.sim1_OT vacusr.t.sim1
./setvac -d=22 -g=256,256 -u=sim1 -p=mhd -off=mpi
make vacini
make vac
cd ..
cp par/vac_OT.par vac.par
Generate starting configuration for the Orszag-Tang test
./vacini < inipar/vacini_OT.par
To generate a parallel configuration for a 2x2 array of processors
./distribution configs/zero1_ot_bin_256.ini configs/zero1_ot_bin_256_np0202.ini
./vac < vac.par
or qsub run.sh
Visualise the results
cd data
idl
From IDL (Using IDL procedure visex22D.pro in the data folder)
.r procedures
.r tvframe
.r visex22D
******************************************************************************************
Compile, Run and visualise results for the Brio-Wu Test
cd src
cp vacusr.t.sim1_BW vacusr.t.sim1
./setvac -d=22 -g=800,10 -u=sim1 -p=mhd -off=mpi
make vacini
make vac
cd ..
cp par/vac_nm_BW.par vac.par
Generate starting configuration for the Orszag-Tang test
./vacini < inipar/vacini_BW.par
To generate a parallel configuration for a 4x1 array of processors
./distribution configs/zero1_bw_bin_256.ini configs/zero1_bw_bin_256_np0401.ini
./vac < vac.par
or qsub run.sh
Visualise the results
cd data
idl
From IDL (Using IDL procedure visex22D.pro in the data folder)
.r procedures
.r tvframe
.r visex22D_BW
******************************************************************************************
Compile, Run and visualise results for the Flux tube Test
cd src
cp vacusr.t.sim1_TUBE vacusr.t.sim1
./setvac -d=33 -g=200,104,104 -u=sim1 -p=mhd -off=mpi
make vacini
make vac
cd ..
cp par/vac_TUBE.par vac.par
Generate starting configuration for the Flux tube test
./vacini < inipar/vacini_TUBE.par
Generate the magnetic flux tube
cd mag_field
idl
From the idl session
.r procedures
.r tvframe
.r B_field_vertical_tube
To generate a parallel configuration for a 2x2 array of processors
cd ..
./distribution configs/3D_tube_modif_200_100_100.ini configs/3D_tube_modif_200_100_100_np010202.ini.ini
cd src
make clean
module add mpi/pgi/openmpi/1.6.4
./setvac -d=33 -g=200,54,54 -u=sim1 -p=mhd -on=mpi
make vacini -f Makefile_MPI
make vac -f Makefile_MPI
Submit the job
qsub mpi_run_mhd.sh
Visualise the results
cd data
idl
From IDL (Using IDL procedure visex22D.pro in the data folder)
.r procedures
.r tvframe
.r visex22D
To Do
1. Add example files - models
- can directly compare with smaug
2. Add basic readme
3. Guidelines for using hdf5
4. convert and check pbc implementation and switch between fixed
5. check that it compiles on N8 using intel compiler