mikelkou
PostDoc in Bioinformatics at @JensenLab-CPR, University of Copenhagen. @scverse core member.
University of CopenhagenCopenhagen, Denmark
Pinned Repositories
astropy-project
Documents and policies regarding the Astropy Project as a whole.
bioconda-recipes
Conda recipes for the bioconda channel.
ecosystem-packages
Registry for scverse ecosystem packages
EuBIC2022_workshop_ML
fava
Functional Associations using Variational Autoencoders
mudata
Multimodal Data (.h5mu) implementation for Python
scverse-tutorials
Tutorials for learning scverse
U-CIE_Web_Resource
U-CIE [/juː 'siː/]: Color encoding of high dimensional data
ucie
ecosystem-packages
Registry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)
mikelkou's Repositories
mikelkou/fava
Functional Associations using Variational Autoencoders
mikelkou/ucie
mikelkou/scverse-tutorials
Tutorials for learning scverse
mikelkou/U-CIE_Web_Resource
U-CIE [/juː 'siː/]: Color encoding of high dimensional data
mikelkou/astropy-project
Documents and policies regarding the Astropy Project as a whole.
mikelkou/bioconda-recipes
Conda recipes for the bioconda channel.
mikelkou/ecosystem-packages
Registry for scverse ecosystem packages
mikelkou/EuBIC2022_workshop_ML
mikelkou/mudata
Multimodal Data (.h5mu) implementation for Python
mikelkou/muon
muon is a multimodal omics Python framework
mikelkou/NAP
mikelkou/NORMA
The Network Makeup Artist (NORMA) is a web tool for interactive network annotation visualization and topological analysis, able to handle multiple networks and annotations simultaneously.
mikelkou/NORMA-2.0
Network annotation visualization
mikelkou/scanpy
Single-cell analysis in Python. Scales to >1M cells.
mikelkou/scvi-tools
Deep probabilistic analysis of single-cell omics data
mikelkou/spatialdata
An open and universal framework for processing spatial omics data
mikelkou/squidpy
Spatial Single Cell Analysis in Python