/fido

Multinomial Logistic-Normal Models (really fast)

Primary LanguageR

Travis build status License

fido (formerly stray)

Multinomial Logistic-Normal Models (really fast)
its a little tar-ball of joy

Citation

Silverman, JD, Roche, K, Holmes, ZC, David, LA, and Mukherjee, S. Bayesian Multinomial Logistic Normal Models through Marginally Latent Matrix-T Processes. 2019, arXiv e-prints, arXiv:1903.11695

License

All source code freely availale under GPL-3 License.

Installation

devtools::install_github("jsilve24/fido")

Or to download the development version

devtools::install_github("jsilve24/fido", ref="develop")

A few notes:

  • There are a few installation options that can greatly speed fido up (often by as much as 10-50 fold). For a more detailed description of installation, take a look at the installation page.
  • Vignettes are prebuilt on the fido webpage. If you want vignettes to build locally during package installation you must also pass the build=TRUE and build_opts = c("--no-resave-data", "--no-manual") options to install_github.

Bugs/Feature requests

Have you checked out our FAQ?

I appreciate bug reports and feature requests. Please post to the github issue tracker here.