Pinned Repositories
aind-ng-link
Python package for the generation of neuroglancer links
bigstream
Tools for distributed alignment of massive images
dask_stitch
Linear blend stitching for map_overlap calls in dask
data_schema
AIND data schema
fishspot
tools for finding discrete bright spots in images (for multiplexed FISH, includes background subtraction, deconv, and blob detection)
imageio
Python library for reading and writing image data
napari-aibs-smartspim-viewer
npy2bdv
Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
psf
quantify point spread functions in 3D
render
Render transformed image tiles
miketaormina's Repositories
miketaormina/aind-ng-link
Python package for the generation of neuroglancer links
miketaormina/data_schema
AIND data schema
miketaormina/bigstream
Tools for distributed alignment of massive images
miketaormina/napari-aibs-smartspim-viewer
miketaormina/psf
quantify point spread functions in 3D
miketaormina/npy2bdv
Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
miketaormina/fishspot
tools for finding discrete bright spots in images (for multiplexed FISH, includes background subtraction, deconv, and blob detection)
miketaormina/imageio
Python library for reading and writing image data
miketaormina/dask_stitch
Linear blend stitching for map_overlap calls in dask
miketaormina/transformy
Coordinate system transformations
miketaormina/render-python
A python interface for render
miketaormina/render
Render transformed image tiles
miketaormina/Rheology
miketaormina/SPIMcode