/revseq

Simple little script to produce the reverse complement of a string

Primary LanguagePythonGNU General Public License v3.0GPL-3.0

revseq

A simple script to generate the (reverse) (complement) of a sequence

Status Python Version License

Tests Codecov

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Requirements

  • Python 3.10 or higher
  • typer
  • icontract
  • rich
  • typeguard

Installation

You can install revseq via pip:

$ pip install revseq

or the latest development version from Github:

$ pip install git+https://github.com/milescsmith/revseq

Usage

By default, the reverse complement is returned.

revseq "aaggctt"

Alternatively, can use within another module or the Python REPL

from revseq import revseq

revseq("aaggctt", rev=True, comp=True)

Contributing

Contributions are very welcome. To learn more, see the Contributor Guide.

License

Distributed under the terms of the GPL 3.0 license, revseq is free and open source software.

Issues

If you encounter any problems, please file an issue along with a detailed description.

Credits