milospjanic/bed2GwasCatalogBinomialMod1

This is a modified version of bed2GwasCatalogBinomial script and it calculates binomial p-value for genomics overlaps using modified binomial probability. This script will download GWAS Catalog, parse to bed files using input terms, intersects parsed GWAS Catalog with input bed file, calculates modified binomial statistics for each overlap.

Shell