mims-harvard/PrimeKG

Install fails because `requirements.txt` contains hard coded paths

bevankoopman opened this issue · 3 comments

bevankoopman commented

pip3 install -r requirements.txt fails as requirements.txt contains hard coded file paths. Error is:

ERROR: Could not install packages due to an OSError: [Errno 2] No such file or directory: '/opt/conda/conda-bld/attrs_1642510447205/work'
abearab commented

I could use conda to build an environment with this file https://github.com/mims-harvard/PrimeKG/blob/main/environment.yml

valkx commented

same issue experienced as indicated by @bevankoopman requirements.txt refers to /opt/conda location. requirements.txt is not formatted for a pip install.

  • 👀1
payalchandak commented

Please review our recent code update. This issue should be fixed using the updated_requirements.txt file. Please open a new issue if there are problems with the new file.