About dock：How long does the preparation phase of adding gasteiger charges to peptide take?
viko-3 opened this issue · 2 comments
Thanks to the authors for their excellent work.
Is it normal to go on for a long time at this step?
do you mean to download the oracle? download oracle does not take too much time. or do you mean docking a ligand? docking a ligand requires a couple of minutes mostly, the time also relies on the size of the ligand you dock.
do you mean to download the oracle? download oracle does not take too much time. or do you mean docking a ligand? docking a ligand requires a couple of minutes mostly, the time also relies on the size of the ligand you dock.
On the screenshot I provided, I'm just loading the oracal provided in the documentation for dock a ligand. but it still stuck at this step.
And, if I use my own protein pdb file to initialize the oracle, it still keep this situation.