mingwhy

mingwhy's Stars

• dohlee/metheor

  :comet: Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)

  Language:Rust438

• MPIIComputationalEpigenetics/WSHScripts

  A collection of scripts for the calculation of Intra-Sample Heterogeneity Scores including FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL.

  Language:R74

• MPIIComputationalEpigenetics/WSHPackage

  R package for the calculation of the following Within-Sample Heterogeneity Scores in Bisulfite Sequencing Data: FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL

  Language:R85

• jmzeng1314/methy_array

  Language:R9458

• calico/scmmd

  Maximum mean discrepancy comparisons for single cell profiling experiments

  Language:Python152

• MNoichl/UMAP-examples-mammoth-

  Language:Jupyter Notebook285

• julianfaraway/rexamples

  worked R examples

  Language:Stan11520

• cdeweyx/DS-Career-Resources

  Compilation of resources for aspiring data scientists

  Language:Python2k635

• shchurch/countland

  tools in python and R for analyzing biological count data, especially from single cell RNAseq

  Language:Jupyter Notebook215

• ljljolinq1010/expression-noise-across-fly-embryogenesis

  studying the conflict between precision and stochasticity of gene expression during development

  Language:R21

• Kyoko-wtnb/FUMA_scRNA_data

  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)

  Language:R227

• zijie0/HumanSystemOptimization

  健康学习到150岁 - 人体系统调优不完全指南

  13k960

• afranks86/mgCov

  Multi-group Covariance Estimation

  Language:R1

• auranic/FisherSeparabilityAnalysis

  Data point cloud separability analysis based on linear Fisher discriminants

  Language:Jupyter Notebook84

• Vityay/ExpVarQuant

  Language:R4

• milo-lab/cellular_turnover

  Language:Jupyter Notebook113

• fengdu78/lihang-code

  《统计学习方法》的代码实现

  Language:Jupyter Notebook18.9k6.3k

• SmirkCao/Lihang

  Statistical learning methods, 统计学习方法(第2版)[李航] [笔记, 代码, notebook, 参考文献, Errata, lihang]

  Language:Python6k1.6k

• patrickjdanaher/JGL-package

  Joint Graphical Lasso R package

  Language:R1

• afranks86/envelopeR

  Language:R2

• kenjihiranabe/The-Art-of-Linear-Algebra

  Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"

  Language:PostScript17.8k2.2k

• minireference/noBSLAnotebooks

  Jupyter notebooks with exercises for the No bullshit guide to linear algebra.

  Language:Jupyter Notebook19645

• vitkl/ParetoTI

  R toolbox for Archetypal Analysis and Pareto Task Inference on single cell data (based on ParTI)

  Language:R307

• HenrikBengtsson/R.matlab

  R package: R.matlab

  Language:R8625

• afranks86/shared-subspace

  Language:TeX41

• barkasn/hogsvdR

  Higher-Order Generalized Singular Value Decomposition R package

  Language:R5

• sctyner/history_of_statistics

  Resources for learning about the history of statistics and statisticians. By statisticians, for statisticians.

  16617

• XiangyunHuang/notesdown

  :book: R 语言学习笔记：数据操作、统计图形和数值优化

  Language:RMarkdown7424

• FlyCellAtlas/genome_references

  Genome references for data processing

  Language:R2

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.2k974