To download all files in a Jupyter workspace:
- Go to File > New Notebook > Python 3 - this will create a new Jupyter Notebook.
- Paste the code snippet below into the code cell in the new Jupyter Notebook
- Click on Jupyter logo (top left of the screen) to open the directory browser. This will show all files and directories in the workspace.
- Find
workspace_archive.tar. download it.
Occassionally, you'll see in the code of a Notebook where it gets data from
a different directory than the current workspace. In other words, the
data is located outside of current ./ working directory.
For example, the code below is trying to get data from
../../data:
def example():
data = os.path.join(os.getcwd(), '..', '..','data')
return np.load(data)To download the data, simply run make_tar_file function from the code snippet
below with dir_name being the path to the data:
dir_name = os.path.join(os.getcwd(), '..', '..','data')
make_tar_file(dir_name)For Python workspaces, use the code snippet below but put it in a Python file instead.
The snippet below compresses all files in a workspace and put them in
workspace_archive.tar file.
""" Source:
- https://stackoverflow.com/questions/48122744/how-to-download-all-files-and-folder-hierarchy-from-jupyter-notebook
"""
import os
import tarfile
def recursive_files(dir_name='.', ignore=None):
for dir_name,subdirs,files in os.walk(dir_name):
if ignore and os.path.basename(dir_name) in ignore:
continue
for file_name in files:
if ignore and file_name in ignore:
continue
yield os.path.join(dir_name, file_name)
def make_tar_file(dir_name='.', target_file_name='workspace_archive.tar', ignore=None):
tar = tarfile.open(target_file_name, 'w')
for file_name in recursive_files(dir_name, ignore):
tar.add(file_name)
tar.close()
dir_name = '.'
target_file_name = 'workspace_archive.tar'
# List of files/directories to ignore
ignore = {'.ipynb_checkpoints', '__pycache__', target_file_name}
make_tar_file(dir_name, target_file_name, ignore)