mirpedrol

Pinned Repositories

• actions-runners

  Instructions and scripts for custom GitHub Actions runners

  Language:Shell00

• class-modules

  A subset of curated nf-core/module and module templates

  Language:Nextflow11

• Draw-centromere-with-karyoploteR

  Drawing centromere constriction at chromosome ideograms, plotted with karyoploteR package from R

  Language:HTML1100

• modules

  Repository to host tool-specific module files for the Nextflow DSL2 community!

  Language:Nextflow1000

• nextflow-website

  Nextflow public web site

  Language:HTML10

• tools

  Python package with helper tools for the nf-core community.

  Language:Python1000

• nf-co2footprint

  [WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.

  Language:Groovy156155

• nf-validation

  Params validation plugin for Nextflow pipelines

  Language:Groovy4855119

• crisprseq

  A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).

  Language:Nextflow301394926

• tools

  Python package with helper tools for the nf-core community.

  Language:Python2421491.1k191

mirpedrol's Repositories