Pinned Repositories
git-lesson
20200718 BCC Git lesson
git_lesson
git_lesson_BCC
images
Images
kraken-biom
Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
kraken_output_parser
Quick script to allow parsing of Kraken report files into nice manageable CSVs
nanostripper
Strip reads from Oxford Nanopore FAST5 files if they meet certain criteria
oneliners
Useful bash one-liners for bioinformatics.
pavian
🌈 Interactive analysis of metagenomics data
PHINCH-Equi
qiime-tools
scripts and methods to use Qiime2 on long-reads
mishkb's Repositories
mishkb/git-lesson
20200718 BCC Git lesson
mishkb/git_lesson
git_lesson_BCC
mishkb/images
Images
mishkb/kraken-biom
Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
mishkb/kraken_output_parser
Quick script to allow parsing of Kraken report files into nice manageable CSVs
mishkb/nanostripper
Strip reads from Oxford Nanopore FAST5 files if they meet certain criteria
mishkb/oneliners
Useful bash one-liners for bioinformatics.
mishkb/pavian
🌈 Interactive analysis of metagenomics data
mishkb/PHINCH-Equi
mishkb/qiime-tools
scripts and methods to use Qiime2 on long-reads