Pinned Repositories
advent-of-code2022
bioconda-recipes
Conda recipes for the bioconda channel.
CheckM
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
demo
distributions
fitness-dial
Django app for fetching health data using Withings API (with MyFitnessPal nutritional information integration).
openerz-api
q2-assembly
QIIME 2 plugin for genome assembly.
q2-types-genomics
QIIME 2 types for genomics plugins.
zsh-qiime2
Small Oh-My-Zsh plugin for QIIME 2 users and developers.
misialq's Repositories
misialq/home-assistant
:house_with_garden: Open source home automation that puts local control and privacy first
misialq/openerz-api
misialq/advent-of-code2022
misialq/bioconda-recipes
Conda recipes for the bioconda channel.
misialq/CheckM
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
misialq/demo
misialq/distributions
misialq/hello-microbiome
misialq/q2-assembly
QIIME 2 plugin for genome assembly.
misialq/q2-types-genomics
QIIME 2 types for genomics plugins.
misialq/home-assistant.io
:blue_book: Home Assistant User documentation
misialq/k8s-at-home
Fork of the archived k8s-at-home charts
misialq/kraken2
The second version of the Kraken taxonomic sequence classification system
misialq/nf-tower
Nextflow Tower system
misialq/publibike-stations
Python code for generating an updated list of PubliBike stations
misialq/q2-checkm
QIIME 2 plugin for assessing the quality of (meta)genomes using CheckM.
misialq/q2-fondue
Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere
misialq/q2-fondue-examples
Materials accompanying q2-fondue article.
misialq/q2-moshpit
MOdular SHotgun metagenome Pipelines with Integrated provenance Tracking
misialq/q2-protein-pca
QIIME2 plugin for PCA analysis of protein sequence phylogeny.
misialq/q2-quality-control
A QIIME 2 plugin for quality control of sequence and feature data
misialq/q2-sourmash
Qiime2 Sourmash Plugin
misialq/q2-taxa
misialq/q2-types
Definitions of common QIIME 2 types.
misialq/q2-vizard
The first choice of wizard lizards for protection and entertainment
misialq/qiime2
Official repository for the QIIME 2 framework.
misialq/quast
Genome assembly evaluation tool
misialq/RESCRIPt
REference Sequence annotation and CuRatIon Pipeline
misialq/rgi
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
misialq/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks