/math414-project

Primary LanguageJupyter Notebook

Approximate Bayesian Computation (ABC) Project

Mahammad Ismayilzada, MATH-414, Stochastic Simulation

This repo contains the code and data for the ABC project report.

Setup

To setup the environment, please use python>=3.10 and install requirements using the requirements.txt file:

pip install -r requirements.txt

Repo structure

  • utils.py: This file contains code for common utilities.
  • example.py: This file contains common code for the synthetic (example) problem.
  • pharmacokinetics.py: This file contains common code for the pharmacokinetics problem.
  • q{n}.py: This file contains the code to run experiments for question n in the project description.
  • data: This folder contains the experiment results.
  • project.ipynb: This interactive notebook contains code for inspection and visualization of experiment results.