Convert "A SAM file generated by Novoalign using reference sequences containing ambiguous nucleotides" to "A SAM file with corrected NM tags ignoring ambifuous nucleotides"
input: A SAM file generated by Novoalign using reference sequences containing ambiguous nucleotides
output: A SAM file with corrected NM tags ignoring ambifuous nucleotides
Copyright 2014-2018 by Hiroyuki MISHIMA (hmishima at nagasaki-u.ac.jp)
License: the MIT license