mjmiossec
Head of Computational Genomics Group, Centre for human Genetics
University of Oxford @CGGOxfordOxford
Pinned Repositories
BAMily
Simple variant caller for the identification of variants present in a subset of individuals and absent in another.
BasicNeuralNetwork
Making a basic neural network in Python 3, building it up as I go along
BioinfinvRepro
Curso de introducción a la bioinformática e investigación reproducible
excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
gemini
a lightweight db framework for exploring genetic variation.
GeneFEAST
GeneFEAST is a gene-centric functional enrichment analysis summarisation and visualisation tool implemented in Python.
kaggle-notebooks
Github repository for all my Python Kaggle notebooks up to date.
mailtopdf-crawler-with-AutoHotKey
Very specific use-case: From open Outlook app on Windows, crawls through each email and prints it to pdf with unique number (this is for a version of Outlook that prevents you from saving emails en masse, e.g. university email). It mostly works.
omniscope
Finding additional species in reference-based assembly data using sequence homology, read depth and directed de novo assembly.
PDFsplit
Very specific use-case: splits a PDF into each one of its pages. Helpful if each page is really meant to be its own document.
mjmiossec's Repositories
mjmiossec/omniscope
Finding additional species in reference-based assembly data using sequence homology, read depth and directed de novo assembly.
mjmiossec/PDFsplit
Very specific use-case: splits a PDF into each one of its pages. Helpful if each page is really meant to be its own document.
mjmiossec/BAMily
Simple variant caller for the identification of variants present in a subset of individuals and absent in another.
mjmiossec/BasicNeuralNetwork
Making a basic neural network in Python 3, building it up as I go along
mjmiossec/BioinfinvRepro
Curso de introducción a la bioinformática e investigación reproducible
mjmiossec/excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
mjmiossec/gemini
a lightweight db framework for exploring genetic variation.
mjmiossec/GeneFEAST
GeneFEAST is a gene-centric functional enrichment analysis summarisation and visualisation tool implemented in Python.
mjmiossec/genomics
A collection of scripts and notes related to genomics and bioinformatics
mjmiossec/kaggle-notebooks
Github repository for all my Python Kaggle notebooks up to date.
mjmiossec/learntoRfromNothing
Learn to code in R from just your laptop and wifi with QNNDukeNguyen
mjmiossec/mailtopdf-crawler-with-AutoHotKey
Very specific use-case: From open Outlook app on Windows, crawls through each email and prints it to pdf with unique number (this is for a version of Outlook that prevents you from saving emails en masse, e.g. university email). It mostly works.
mjmiossec/pathoscope2biom
an script for convert pathoscope2 output in biom format
mjmiossec/Temp
For any data that does not yet have a home.
mjmiossec/UpSetPlot
Draw UpSet plots with Matplotlib