mkierczak

aiRbnb

RaukR 2019 project

airspyhf

Code repository for AirspyHF+

AIS-catcher

Dual channel AIS receiver for RTL SDR dongles and Airspy HF+. Output is send as NMEA messages to screen or broadcasted via a UDP network connection.

annovarR

annovarR: a variant annotation and visualization system based on R and Shiny framework

cutadapt

cutadapt removes adapter sequences from sequencing reads

mkierczak/AIS-catcher

Dual channel AIS receiver for RTL SDR dongles and Airspy HF+. Output is send as NMEA messages to screen or broadcasted via a UDP network connection.

mkierczak/autoencoders_workshop

Collection of materials for teaching about autoencoders

mkierczak/Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

mkierczak/awesome-R

A curated list of awesome R packages, frameworks and software.

mkierczak/burden_testing

A collection of scripts to run variant aggregation tests from whole-genome sequencing data.

mkierczak/dispr

Degenerate In-Silico PcR

mkierczak/dotfiles

My personal collection of dotfiles.

mkierczak/Ender3V2S1

This is optimized firmware for Ender3 V2/S1 3D printers.

mkierczak/Examples

Virtual Machine examples

mkierczak/FreeVersion

A featured-limited version the SDR4.space embedded software, originally designed for embedded GPU systems.

mkierczak/GarminInstinct2s-BBWF

Battery saving watch face for instinct 2s with full set of features

mkierczak/ggmap

A package for plotting maps in R with ggplot2

mkierczak/hop_analysis

mkierczak/lighthousemap

OpenStreetMap's Blinking Beacons

mkierczak/LTS-BiodiversityAnalysisCAO

Code repository for the support project P_Snoeijs-Leijonmalm_2205, specifically related to identifying and mapping COI reads.

mkierczak/mkierczak

Marcin Kierczak

mkierczak/mkteachr

Functions, datasets, examples and other assets related to teaching R.

mkierczak/nmeasimulator

NMEA Sentence Generator

mkierczak/paintbynumbersgenerator

Paint by numbers generator

mkierczak/pico-tflmicro

Pico TensorFlow Lite Port

mkierczak/pyais

AIS message decoding and encoding in Python (AIVDM/AIVDO)

mkierczak/r_oop_simulation

Simulate disease spreading using R OOP systems

mkierczak/reference_database_creator

creating reference databases for amplicon sequencing

mkierczak/rvtests

Rare variant test software for next generation sequencing data

mkierczak/Terrain2STL

A web-based service that converts publicly available HGT files to useful STL files.

mkierczak/thebaldgeek.github.io

Rough notes on how to go about setting up the hardware and software for ACARS decoding.

mkierczak/TouchTerrain_for_CAGEO

Touch Terrain: A python app to create 3D printable terrain models (STL/OBJ) from only elevation data (via Google Earth Engine) or from a local geotiff. Has been used for CNC terrain models. Runs as a web app (http://touchterrain.org), as .py file (standalone.py) or as jupyter notebook. Docker image: https://github.com/ChHarding/TouchTerrain_jupyter

mkierczak/tre

The approximate regex matching library and agrep command line tool.

mkierczak/vep_loftee

Docker image for VEP which supports Loftee Plugin

mkierczak/vsearch_repro

Versatile open-source tool for microbiome analysis