mkleyman

mkleyman's Stars

• lingfeiwang/normalisr

  Causal inference, differential expression, and co-expression for scRNA-seq

  Language:Python173

• google/python-fire

  Python Fire is a library for automatically generating command line interfaces (CLIs) from absolutely any Python object.

  Language:Python26.8k1.4k

• soroushchehresa/awesome-coronavirus

  🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)

  Language:TypeScript1.6k347

• stevetsa/awesome-microbes

  List of computational resources for analyzing microbial sequencing data.

  6428

• SaskiaFreytag/schex

  Language:R729

• mikelove/awesome-multi-omics

  List of software packages for multi-omics analysis

  703159

• unslothai/hyperlearn

  2-2000x faster ML algos, 50% less memory usage, works on all hardware - new and old.

  Language:Jupyter Notebook1.8k121

• pachterlab/sircel

  Identify cell barcodes from single-cell genomics sequencing experiments

  Language:Jupyter Notebook4114

• crazyhottommy/getting-started-with-genomics-tools-and-resources

  Unix, R and python tools for genomics and data science

  Language:Shell1.1k343

• vaexio/vaex

  Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python, ML, visualization and exploration of big tabular data at a billion rows per second 🚀

  Language:Python8.2k590

• blengerich/drpca

  Differential Robust PCA

  Language:Jupyter Notebook121

• tompollard/tableone

  Create "Table 1" for research papers in Python

  Language:Python16038

• mwouts/jupytext

  Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts

  Language:Python6.6k386

• dmlc/dgl

  Python package built to ease deep learning on graph, on top of existing DL frameworks.

  Language:Python13.3k3k

• google/jax

  Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more

  Language:Python29.6k2.7k

• Kingsford-Group/scallop

  Scallop is a reference-based transcriptome assembler for RNA-seq

  Language:C++8818

• blengerich/Personalized_Regression

  Personalized Regression

  Language:Python152

• kailashahirwar/cheatsheets-ai

  Essential Cheat Sheets for deep learning and machine learning researchers https://medium.com/@kailashahirwar/essential-cheat-sheets-for-machine-learning-and-deep-learning-researchers-efb6a8ebd2e5

  15.1k3.4k

• blengerich/GenAMap

  Visual Machine Learning of Genome-Phenome Associations

  Language:C++227