Pinned Repositories
miso-lims
MISO: An open-source LIMS for NGS sequencing centres
runscanner
Monitors directories on the file system containing the output from sequencing instruments (e.g. Illumina) and reports their status and metrics
visionmate-client
Client for accessing a Thermo Scientific VisionMate scanner via TCP/IP
wdl
Workflow Description Language - Specification and Implementations
bamQC
Workflow to run bam-qc-metrics (https://github.com/oicr-gsi/bam-qc-metrics)
bwaMem
Workflow for BWA mem
dashi
Python Dash visualization of OICR QC data
sequenza
Workflow for Sequenza, cellularity and ploidy
shesmu
Decision-driven action launching system
seqware
This is the SeqWare Project's main repo.
mlaszloffy's Repositories
mlaszloffy/wdl
Workflow Description Language - Specification and Implementations