mlin/spVCF

Issues

• Transcoder class should have a virtual destructor

  #31 opened a year ago by RussellTaylor
  0

• filtering spvcf

  #25 opened 3 years ago by JakeHagen
  0

• Fields lost from squeezed output if DP not present in input

  #26 opened 3 years ago by RussellTaylor
  3

• convey PL ~ DP regression model

  #24 opened 4 years ago by mlin
  0

• align checkpoints with BGZF block boundaries

  #16 opened 6 years ago by mlin
  0

• tabix slicing improvements

  #10 opened 6 years ago by mlin
  1

• tabix: fast mode to get variant cells only

  #18 opened 6 years ago by mlin
  0

• sample subset extraction in spvcf decode

  #23 opened 4 years ago by mlin
  0

• optionally preserve binned GQ

  #22 opened 4 years ago by mlin
  0

• configurable resolution for squeezed DP

  #20 opened 6 years ago by mlin
  1

• change ##fileformat= header to and fro

  #15 opened 6 years ago by mlin
  0

• Change --squeeze from opt-in to opt-out

  #17 opened 6 years ago by mlin
  0

• better input validation

  #14 opened 6 years ago by mlin
  1

• Multithreaded encoder

  #7 opened 6 years ago by mlin
  0

• Format spec

  #11 opened 6 years ago by mlin
  0

• tabix slicing

  #6 opened 6 years ago by mlin
  1

• General questions

  #8 opened 6 years ago by fritzsedlazeck
  3