Pinned Repositories
TCR-structure-binding-prediction
TCRab-pairing
Scripts to reproduce the analysis in Milighetti et al, 2024 (https://www.biorxiv.org/content/10.1101/2024.05.24.595718v1)
CovidsortiumTCRExpanded
Scripts that produce data and figures for the COVIDsortium TCR paper (Aug 2022)
ERGO
ERGO is a deep learing based model for predicting TCR-peptide binding.
GA-IPA
Combining GA and IPA to infer paralog pairing
MolProbity
Protein and nucleic acid validation service
PRESTO
An automated pipeline for the analysis of TCR-pMHC structures deposited to the PDB
vdjdb-db
🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!
pyrepseq
Python library for immune repertoire analysis
mm523's Repositories
mm523/TCRab-pairing
Scripts to reproduce the analysis in Milighetti et al, 2024 (https://www.biorxiv.org/content/10.1101/2024.05.24.595718v1)
mm523/MolProbity
Protein and nucleic acid validation service
mm523/TCR-structure-binding-prediction
mm523/GA-IPA
Combining GA and IPA to infer paralog pairing
mm523/PRESTO
An automated pipeline for the analysis of TCR-pMHC structures deposited to the PDB
mm523/ERGO
ERGO is a deep learing based model for predicting TCR-peptide binding.