Pinned Repositories
anguilla
Code for Barth et al.
BIO395_2020
Instructions for 2020 version of BIO395 course
evol2019
Code for analyses presented at Evolution 2019
F4
Assessing confidence in introgression among four populations
Fitchi
Haplotype genealogies based on Fitch distances
kumara
Comment on Munoz-Rodriguez et al. (2018)
opsin_evolution
Code for Musilova et al.
snapp_prep
Prepare XML input files for divergence-time estimation with SNAPP
supergenes
tutorials
Tutorials on phylogenetic and phylogenomic inference
mmatschiner's Repositories
mmatschiner/tutorials
Tutorials on phylogenetic and phylogenomic inference
mmatschiner/F4
Assessing confidence in introgression among four populations
mmatschiner/snapp_prep
Prepare XML input files for divergence-time estimation with SNAPP
mmatschiner/kumara
Comment on Munoz-Rodriguez et al. (2018)
mmatschiner/supergenes
mmatschiner/anguilla
Code for Barth et al.
mmatschiner/BIO395_2020
Instructions for 2020 version of BIO395 course
mmatschiner/evol2019
Code for analyses presented at Evolution 2019
mmatschiner/Fitchi
Haplotype genealogies based on Fitch distances
mmatschiner/opsin_evolution
Code for Musilova et al.
mmatschiner/panama
Code for Stange et al. (2018)
mmatschiner/QuIBL
Quantifying Introgression via Branch Lengths
mmatschiner/behaviour_gwas
Simulations of diversification with recombination and hybridization in LT cichlids with msprime
mmatschiner/c-genie
Estimating the sizes of coalescent genes ("c-genes") and single-topology tracts.
mmatschiner/CladeAge-Tutorial
Fossil-based divergence-time estimation with CladeAge
mmatschiner/continental
Code for manuscript on the timeline of cichlid diversification across continents
mmatschiner/fbd_test
An assessment of the robustness of the FBD process to model violations
mmatschiner/foosball
Data and analysis of foosball matches with millanek.
mmatschiner/msprime
A reimplementation of Hudson's classical ms simulator for modern data sets.
mmatschiner/notothenioid_phylogenomics
Phylogenomic analyses of notothenioid and outgroup genomes