mmnashrullah
Postdoctoral Researcher at National Research and Innovation Agency (BRIN) | Researcher at Generasi Biologi Indonesia Foundation | Instructor at INBIO Indonesia
Generasi Biologi Indonesia Foundation
Pinned Repositories
Bioinformatics-User-Meeting
bukupython310
Ini Adalah Repositori Kode dan Tutorial untuk Buku Dasar-Dasar Python 3.10
bukupython38-39
Repositori Kode dan Tutorial untuk Buku Dasar-Dasar Python 3.8/3.9: Sebuah Pengantar Praktis Pemrograman Python untuk Pemrograman Ilmiah
DendroPy
A Python library for phylogenetic scripting, simulation, data processing and manipulation.
Docking-4ieh
Docking Tutorial Using Autodock Vina version 1.2.3 (2021) and AutoDock-GPU Version 1.5.3
dokdo
A Python package for microbiome sequencing analysis with QIIME 2
GeoPhylo
Converts a phylogenetic tree and the tip taxa's geographic coordinates into a KML file for Google Earth viewing. This is the work of Andrew W. Hill, Brian Stucky, and Robert Guralnick. We will be working to add many new features as well as integrate the project with another of ours, PhyloBox.
HaplotypeExplorer
HaplotypeExplorer is an interactive haplotype network viewer for spatiotemporal dissection of multimodal epidemic spectra.
PHYLOGEOrec-alpha
Alpha version of PHYLOGEOrec
mmnashrullah's Repositories
mmnashrullah/PHYLOGEOrec-alpha
Alpha version of PHYLOGEOrec
mmnashrullah/Bioinformatics-User-Meeting
mmnashrullah/bukupython310
Ini Adalah Repositori Kode dan Tutorial untuk Buku Dasar-Dasar Python 3.10
mmnashrullah/bukupython38-39
Repositori Kode dan Tutorial untuk Buku Dasar-Dasar Python 3.8/3.9: Sebuah Pengantar Praktis Pemrograman Python untuk Pemrograman Ilmiah
mmnashrullah/DendroPy
A Python library for phylogenetic scripting, simulation, data processing and manipulation.
mmnashrullah/Docking-4ieh
Docking Tutorial Using Autodock Vina version 1.2.3 (2021) and AutoDock-GPU Version 1.5.3
mmnashrullah/dokdo
A Python package for microbiome sequencing analysis with QIIME 2
mmnashrullah/GeoPhylo
Converts a phylogenetic tree and the tip taxa's geographic coordinates into a KML file for Google Earth viewing. This is the work of Andrew W. Hill, Brian Stucky, and Robert Guralnick. We will be working to add many new features as well as integrate the project with another of ours, PhyloBox.
mmnashrullah/HaplotypeExplorer
HaplotypeExplorer is an interactive haplotype network viewer for spatiotemporal dissection of multimodal epidemic spectra.
mmnashrullah/hergenrother-16S-mouse-2022Sept
Code for the Hergenrother 2022 mouse antimicrobiall study
mmnashrullah/mauroib-alpha-diversities
alpha-diversities study
mmnashrullah/MetaXplore
MetaXplore, an interactive, user-friendly platform that enables the discovery and visualization of targeted metagenomic data
mmnashrullah/micb475_project2
repository for project 2 micb475
mmnashrullah/Microbial-Bioinformatics-101.1-A-Practical-Workshop-for-Whole-Genome-Sequencing-WGS-Data-Analysis
Microbial bioinformatics merges advanced computing with microbiology, decoding genetic and functional traits of microorganisms. This workshop equips BRIN staff to leverage sequencing and analysis tools for deeper insights into microbial interactions and applications in research.
mmnashrullah/modeltest
Best-fit model selection
mmnashrullah/OC-INBIO-2023
Repositori seluruh Online Course INBIO yang dimentori saya pribadi Tahun 2023
mmnashrullah/OC134
Materi Course OC134 Training Python tingkat 1 INBIO INDONESIA
mmnashrullah/openbabel
Open Babel is a chemical toolbox designed to speak the many languages of chemical data.
mmnashrullah/Plant_microbiome_transplantation
mmnashrullah/Primer_Blast_Multiple
Fork of ShuXingYu94's Primer Blast Multiple (https://github.com/ShuXingYu94/Primer_Blast_Multiple)
mmnashrullah/py-metagenomics
Some python libs and scripts for metagenomic analyses
mmnashrullah/rshiny-server-cmd
Command line wrapper to run a named R Shiny Server script/folder
mmnashrullah/sayhello
Test untuk membuat paket sederhana
mmnashrullah/sib-swiss-training-collection
Collection of bioinformatics training materials from SIB Swiss
mmnashrullah/trimal
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0