Pinned Repositories
ml4h
warp
WDL Analysis Research Pipelines
terra-ui
Web user interface for the Terra platform
five-dollar-genome-analysis-pipeline
Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline
gatk4-data-processing
Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools
gatk4-exome-analysis-pipeline
This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.
gatk4-rnaseq-germline-snps-indels
Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools
fiss
FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine
library_test
Practice for creating a public library of code that can be imported into a Jupyter notebook
wdl
Workflow Description Language - Specification and Implementations
mmorgantaylor's Repositories
mmorgantaylor/fiss
FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine
mmorgantaylor/library_test
Practice for creating a public library of code that can be imported into a Jupyter notebook
mmorgantaylor/wdl
Workflow Description Language - Specification and Implementations