Pinned Repositories
carveme
CarveMe: genome-scale metabolic model reconstruction
cobrababel
cobrapy
COBRApy is a package for constraint-based modeling of biological networks
cobrapy-website
opencobra.github.io/cobrapy
dev_container
This repository is a container for developing and deploying KBase modules. To use this, you must already have a "runtime" directory, which contains the neccesary binaries and libraries. For an idea of what is expected to be in this runtime, consult the [bootstrap repository](https://git.kbase.us/bootstrap.git/).
DynamicGut
kb_model_seed
This repository contains wrapper code to integrate the ModelSEED Perl libraries into KBase.
KBaseFBAModeling
Flux balance modeling service. Deploys both the client and service codes.
mackinac
Mackinac: A bridge between ModelSEED and COBRApy
MMinte
mmundy42's Repositories
mmundy42/mackinac
Mackinac: A bridge between ModelSEED and COBRApy
mmundy42/cobrababel
mmundy42/MMinte
mmundy42/carveme
CarveMe: genome-scale metabolic model reconstruction
mmundy42/cobrapy
COBRApy is a package for constraint-based modeling of biological networks
mmundy42/cobrapy-website
opencobra.github.io/cobrapy
mmundy42/dev_container
This repository is a container for developing and deploying KBase modules. To use this, you must already have a "runtime" directory, which contains the neccesary binaries and libraries. For an idea of what is expected to be in this runtime, consult the [bootstrap repository](https://git.kbase.us/bootstrap.git/).
mmundy42/DynamicGut
mmundy42/kb_model_seed
This repository contains wrapper code to integrate the ModelSEED Perl libraries into KBase.
mmundy42/KBaseFBAModeling
Flux balance modeling service. Deploys both the client and service codes.
mmundy42/mminte-mp
Microbial Metabolic interactions
mmundy42/ModelSEEDDatabase
This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach
mmundy42/narrative_job_service
mmundy42/narrative_method_specs
mmundy42/ProbAnno-Standalone
A version of Probabalistic Annotation that does not communicate with any servers
mmundy42/ProbModelSEED
mmundy42/Workspace