moOsmanMD

Pinned Repositories

• SCEVAN

  R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

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• Monopogen

  SNV calling from single cell sequencing

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• numbat

  Haplotype-aware CNV analysis from single-cell RNA-seq

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moOsmanMD's Repositories