Pinned Repositories
acl-anthology
Data and software for building the ACL Anthology.
adapter-transformers
Huggingface Transformers + Adapters = ❤️
bio-ner
Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the-art models.
biobert-pytorch
PyTorch Implementation of BioBERT
BioCreative-VII-Track-2-NLM-CHEM-track-Full-text-Chemical-Identification
datasets
🤗 The largest hub of ready-to-use datasets for ML models with fast, easy-to-use and efficient data manipulation tools
drugprot-relation-extraction
This repository includes pytorch codes for using domain-specific BERT models, along with proposed const-BERT variants on the Drugprot track of BioCreative VII Challenge.
inception-external-recommender
Get annotation suggestions for the INCEpTION text annotation platform from spaCy, Sentence BERT, scikit-learn and more. Runs as a web-service compatible with the external recommender API of INCEpTION.
KGPool
[ACL 2021] KGPool: Dynamic Knowledge Graph Context Selection for Relation Extraction
WeLT
A cost-sensitive BERT that handles the class imbalance for the task of biomedical NER.
mobashgr's Repositories
mobashgr/WeLT
A cost-sensitive BERT that handles the class imbalance for the task of biomedical NER.
mobashgr/acl-anthology
Data and software for building the ACL Anthology.
mobashgr/adapter-transformers
Huggingface Transformers + Adapters = ❤️
mobashgr/bio-ner
Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the-art models.
mobashgr/biobert-pytorch
PyTorch Implementation of BioBERT
mobashgr/BioCreative-VII-Track-2-NLM-CHEM-track-Full-text-Chemical-Identification
mobashgr/datasets
🤗 The largest hub of ready-to-use datasets for ML models with fast, easy-to-use and efficient data manipulation tools
mobashgr/drugprot-relation-extraction
This repository includes pytorch codes for using domain-specific BERT models, along with proposed const-BERT variants on the Drugprot track of BioCreative VII Challenge.
mobashgr/inception-external-recommender
Get annotation suggestions for the INCEpTION text annotation platform from spaCy, Sentence BERT, scikit-learn and more. Runs as a web-service compatible with the external recommender API of INCEpTION.
mobashgr/KGPool
[ACL 2021] KGPool: Dynamic Knowledge Graph Context Selection for Relation Extraction
mobashgr/mayoclinic-scrapper
Scrapping diseases information from Mayo Clinic and saving it in Neo4j
mobashgr/MTL-Bioinformatics-2016
mobashgr/SciFive
SciFive: a text-text transformer model for biomedical literature
mobashgr/SolvingAlmostAnythingWithBert
BioBert Pytorch
mobashgr/transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.