Modeling & Simulation (IBG-1)

Modeling & Simulation group at IBG-1

Jülich, Germany

Pinned Repositories

13C15N_abundance_correction
Correction method as described in https://doi.org/10.1021/acs.analchem.9b01788
Language:Python1 7 00
CellSium
CellSium – Cell Simulator for microfluidic microcolonies
Language:Python3 8 13
FluxML
A Universal Modeling Language for Metabolic Flux Analysis
Language:C++12 9 246
hops
Highly Optimized Polytope Sampling
Language:C++13 9 00
hopsy
Python interface to C++ sampling library HOPS
Language:C++14 11 33
KriKit
Language:MATLAB8 10 02
molyso
molyso - Mother Machine Analysis Software
Language:Python10 8 43
MooViE
Multi-objective optimization Visualization Engine
1 10 00
mycelyso
MYCEelium anaLYsis SOftware
Language:Python2 10 13
OCDES
OCDE Simulator
Language:MATLAB1 1 00

Modeling & Simulation (IBG-1)'s Repositories

modsim/hopsy
Python interface to C++ sampling library HOPS
Language:C++14 11 33
modsim/hops
Highly Optimized Polytope Sampling
Language:C++13 9 00
modsim/FluxML
A Universal Modeling Language for Metabolic Flux Analysis
Language:C++12 9 246
modsim/molyso
molyso - Mother Machine Analysis Software
Language:Python10 8 43
modsim/KriKit
Language:MATLAB8 10 02
modsim/CellSium
CellSium – Cell Simulator for microfluidic microcolonies
Language:Python3 8 13
modsim/mycelyso
MYCEelium anaLYsis SOftware
Language:Python2 10 13
modsim/13C15N_abundance_correction
Correction method as described in https://doi.org/10.1021/acs.analchem.9b01788
Language:Python1 7 00
modsim/MooViE
Multi-objective optimization Visualization Engine
1 10 00
modsim/OCDES
OCDE Simulator
Language:MATLAB1 1 00
modsim/1315N_abundance_correction
redirect to the correct page
0 7 00
modsim/redicon-tools
Tools for running and analysing Brownian dynamics simulations with BD_BOX
Language:Shell00
modsim/bug_report_example
Template for reporting bugs including code and data
Language:Python8 02
modsim/DNest4
Diffusive Nested Sampling
Language:C++1 0
modsim/himics
HiMiCs – High Throughput Microfluidic Single Cell Analysis
modsim/hopsy-staged-recipe
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python1 0
modsim/jungle
A set of ImageJ plugins/macros for analysing time-lapse image sequences of microbial population development in microfluidic lab-on-a-chip devices.
Language:Java
modsim/jungle-calibration
Language:Java2 0
modsim/jungle-docs
2 0
modsim/jungle-ij1-macros
2 0
modsim/junn
WIP: JUNN – Jülich U-Net Neural Network
Language:Python9 0
modsim/KriKit_MOGO_ChromatographyCaseStudies
Language:Matlab
modsim/margss
Sampling Genome-scale models as a service
Language:JavaScript8 1
modsim/mycelyso-inspector
MYCEelium anaLYsis SOftware - Inspector
Language:Python10 01
modsim/OverfittingExample
A small matlab example demonstrating how complex models lead to overfitting.
Language:MATLAB9 0
modsim/pilyso-io
Python Image anaLYsis SOftware library - Input / Output
Language:Python8 01
modsim/pilyso-io-omero
Python Image anaLYsis SOftware library - Input / Output - OMERO plugin
Language:Python8 01
modsim/redicon-dune-immo
Language:Makefile6 0
modsim/SurEmCo
Superresolution Emitter Counter Analysis Software
Language:C++7 0
modsim/uNAC-staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python1 0