moldyn-nagel

moldyn-nagel's Stars

• beartype/beartype

  Unbearably fast near-real-time hybrid runtime-static type-checking in pure Python.

  Language:Python2.6k1635157

• pdoc3/pdoc

  :snake: :arrow_right: :scroll: Auto-generate API documentation for Python projects

  Language:Python1.1k10323145

• Velron/doxygen-bootstrapped

  Customize doxygen output to use the twitter bootstrap framework.

  Language:JavaScript401281672

• tqdm/tqdm.cpp

  C++ port of tqdm

  Language:C++314144629

• klmr/cpp11-range

  Range-based for loops to iterate over a range of numbers or values

  Language:C++30617538

• bhargavchippada/forceatlas2

  Fastest Gephi's ForceAtlas2 graph layout algorithm implemented for Python and NetworkX

  Language:Python281103181

• GrossfieldLab/loos

  LOOS: a lightweight object-oriented structure analysis library

  Language:C++121164926

• ebov/space-time

  Analysis of EBOV genome sequence from Guinea, Sierra Leone and Liberia from 2014-2016

  Language:Jupyter Notebook57161219

• juanshishido/tufte

  Language:Python404415

• mariaderrico/DPA

  The DPA package is the scikit-learn compatible implementation of the Density Peaks Advanced clustering algorithm. The algorithm provides robust and visual information about the clusters, their statistical reliability and their hierarchical organization.

  Language:Jupyter Notebook27369

• moldyn/MoSAIC

  Correlation-based feature selection of Molecular Dynamics simulations

  Language:Python252102

• moldyn/dcTMD

  Analysis framework of dissipation-corrected targeted molecular dynamics (dcTMD) simulations.

  Language:Python14010

• moldyn/NorMI

  Generalized Kraskov Estimator for Normalized Mutual Information

  Language:Python10021

• moldyn/MSMPathfinder

  Finding pathways from an Markov State Model

  Language:C++9103

• moldyn/HP35

  Selecting Features for Markov Modeling: A Case Study on HP35

  Language:HiveQL8001

• moldyn/msmhelper

  Helper function for Markov State Models

  Language:Python81103

• braniii/prettypyplot

  Formerly hosted at https://gitlab.com/braniii/prettypyplot

  Language:Python5323

• moldyn/HP35-DESRES

  DESRES trajectory of wild type HP-35 at 360K

  5200