/Hodgkin-Huxley_network

Model 3 HH neurons connected in different motifs and different axonal delays. Compute synchronization between spikes and information flow between them.

Primary LanguageJupyter Notebook

Hodgkin-Huxley_network

https://thesiscommons.org/yex29/

Simulate a simple delay-coupled Hodgkin-Huxley neuronal network with an option to modulate the external signal.

necessary packages:

  • numpy
  • scipy
  • matplotlib
  • pandas
  • seaborn

simulation.py: The script used to simulate the neuronal network
ANALYSIS.ipynb: codes for data analysis such as synchrony measure, information transmission efficiency calculation
Plot_gen.ipynb: Make all necessary plots for the Bachelor thesis