rascaf-join endless

[matiasfevo]

Hello, I am running rascaf but in rascaf-join it stays for ever and no output is generated. I can see with top that it is running.

this is the run status:

Found raw assembly file: mejora1sorted.bam
Finish reading the rascaf output files.
b

any idea?

thanks in advance

[mourisl]

It looks like a bug of the program. I'll look into this. If it is possible, could you please email me (lsong10@jhu.edu) the output of rascaf for me to debug?

Thanks,
Li