mpxv-lineages/lineage-designation

Proposal for a sublineage of A, sequenced in Nigeria and UK

corneliusroemer opened this issue · 0 comments

There's a cluster of 4 sequences with recent circulation in the UK. It was previously identified in Nigeria.

To my knowledge this is the cluster that UKHSA called A.3 in a recent technical report. So it would make sense to give this also the official name A.3 here.

image

https://nextstrain.org/staging/monkeypox/hmpxv1/big?m=div

Defining mutations (reading off the branch mutations):

Unique (3) :G96841A, C100971T, C134078T
Homoplasies (3 ):G61844A, C84008T, C151050T

Sequences: OP536812, OP413718, MK783033, MG693723