mragsac

mragsac's Stars

• bluesky-social/social-app

  The Bluesky Social application for Web, iOS, and Android

  Language:TypeScript13.3k1.7k

• gymrek-lab/happler

  A haplotype-based fine-mapping method

  Language:Jupyter Notebook3

• kaiakamatsu/MAGEPRO

  Language:R3

• renan-r-santos/pixi-kernel

  Jupyter kernels using Pixi for reproducible notebooks

  Language:Python272

• prefix-dev/pixi

  Package management made easy

  Language:Rust3.4k193

• bpc-clone/bpc_chrome_support

  5.2k410

• google/comprehensive-rust

  This is the Rust course used by the Android team at Google. It provides you the material to quickly teach Rust.

  Language:Rust28k1.7k

• samtools/hts-specs

  Specifications of SAM/BAM and related high-throughput sequencing file formats

  Language:TeX657172

• kennethleungty/AWS-Certified-Cloud-Practitioner-Notes

  Notes compiled based on AWS E-Learning lessons and transcripts

  889357

• moshi4/pyGenomeViz

  A genome visualization python package for comparative genomics

  Language:Python28823

• deeptools/pyGenomeTracks

  python module to plot beautiful and highly customizable genome browser tracks

  Language:Python779114

• stevecheckoway/ucsddissertation

  LaTeX class file for writing dissertations at UC San Diego

  Language:TeX9654

• sandbox-bio/sandbox.bio

  Interactive bioinformatics tutorials

  Language:JavaScript258

• Phlya/adjustText

  A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

  Language:Jupyter Notebook1.5k87

• jeroenjanssens/data-science-at-the-command-line

  Data Science at the Command Line

  Language:HTML3.8k766

• kovidgoyal/kitty

  Cross-platform, fast, feature-rich, GPU based terminal

  Language:Python24.8k993

• axolo-co/developer-resources

  A collection of resources to help engineering teams review pull requests faster and improve their workflow.

  4812

• laderast/bash_for_bioinformatics

  Beginning of a textbook for shell skills for bioinformatics

  Language:R105

• niemasd/BISB-BMI-Handbook

  Handbook for the Bioinformatics & Systems Biology (BISB) and Biomedical Informatics (BMI) PhD programs at UC San Diego

  Language:Python5

• chrchang/plink-ng

  A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.

  Language:C416126

• pjgreer/ukb-rap-tools

  Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform

  Language:Shell459

• posquit0/Awesome-CV

  :page_facing_up: Awesome CV is LaTeX template for your outstanding job application

  Language:TeX23.3k4.8k

• browning-lab/ukb-phasing

  A pipeline for phasing UK Biobank whole genome sequence data

  Language:Shell145

• tanghaibao/goatools

  Python library to handle Gene Ontology (GO) terms

  Language:Python783210

• hail-is/hail

  Cloud-native genomic dataframes and batch computing

  Language:Python984247

• owkin/PyDESeq2

  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

  Language:Python59264

• dtinth/comic-mono-font

  A legible monospace font... the very typeface you’ve been trained to recognize since childhood

  Language:Python2.6k69

• HumanCellAtlas/sctools

  Utilities for large scale distributed single cell data processing

  Language:Python248

• TheJacksonLaboratory/scanpy_recipes

  Generalized and aggregated analysis functions for working with Anndata and Scanpy

  Language:Python7

• laminlabs/nbproject

  Light-weight Jupyter notebook tracker.

  Language:Python34