functions needed to access and prepare various COVID data sources.
This package is divided into two main sections: analytical datasets and data visualizations.
You can install the released version of SaviR from Github with:
devtools::install_github("CDCgov/SaviR")| Metadata Functions | Get Functions | Calculation Functions | Production Functions |
|---|---|---|---|
| get_one_table | get_covid_sources | calc_add_risk | prod_sitrep |
| get_country_coords | get_testing | ||
| get_vaccinations |
- Metadata is stored in this package and can be called:
metadata <- onetable
country_coordinates <- country_coords IN DEVELOPMENT
| Plot Functions | Map Functions | Table Functions |
|---|---|---|
| plot_epicurve | map_template | table_10mostcases |
| plot_epicurve_ind | map_burden | table_10mostincidence |
| plot_epicurve_epidouble | map_trend | table_10percentchange |
| plot_epicurve_dailydouble | map_vaccinations | table_10vaccinations |
| plot_riskmatrix | ||
| plot_vaxcoverage |
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