Robinson-Rechavi Group - Evolutionary Bioinformatics

Switzerland

Pinned Repositories

A-robust-method-for-detecting-positive-selection-on-regulatory-sequences
We present an in silico mutagenesis based approach to transcription factor binding sites evolution, based on a machine learning model of binding.
Language:R0 0 00
Adaptive-evolution-in-late-development-and-adult
Study the relative contributions of relaxation of purifying selection vs. increase in positive selection, in the observed high sequence divergence of genes from late development.
Language:R0 0 00
bioquery
Language:JavaScript0 0 00
BraLan3
Language:R00
expression-noise-across-fly-embryogenesis
studying the conflict between precision and stochasticity of gene expression during development
Language:R0 0 00
fastcodeml
Optimization strategies for fast detection of positive selection on phylogenetic trees
Language:C++00
godon
Forked from https://bitbucket.org/Davydov/godon
Language:Go00
godon-tutorial
a demonstration of Godon usage; Godon is implementing codon model optimization written in Go
Language:F*00
Method-matters-in-gene-family-evolution
Language:R00
RRTree
A program for relative-rate tests
Language:C00

mrrlab/A-robust-method-for-detecting-positive-selection-on-regulatory-sequences
We present an in silico mutagenesis based approach to transcription factor binding sites evolution, based on a machine learning model of binding.
Language:R0 0 00
mrrlab/Adaptive-evolution-in-late-development-and-adult
Study the relative contributions of relaxation of purifying selection vs. increase in positive selection, in the observed high sequence divergence of genes from late development.
Language:R0 0 00
mrrlab/bioquery
Language:JavaScript0 0 00
mrrlab/BraLan3
Language:R00
mrrlab/expression-noise-across-fly-embryogenesis
studying the conflict between precision and stochasticity of gene expression during development
Language:R0 0 00
mrrlab/fastcodeml
Optimization strategies for fast detection of positive selection on phylogenetic trees
Language:C++00
mrrlab/godon
Forked from https://bitbucket.org/Davydov/godon
Language:Go00
mrrlab/godon-tutorial
a demonstration of Godon usage; Godon is implementing codon model optimization written in Go
Language:F*00
mrrlab/Method-matters-in-gene-family-evolution
Language:R00
mrrlab/RRTree
A program for relative-rate tests
Language:C00
mrrlab/taxonbridge
R package to merge the NCBI taxonomy and the GBIF backbone taxonomy
Language:R00
mrrlab/Testing_the_ortholog_conjecture