msk-access/nucleo_qc

Quality Control Workflow for UMI based BAMs

Nucleo Quality Control

Workflows that generate, aggregate, and visualize quality control files for the Nucleo pipeline.

• Documentation: https://cmo-ci.gitbook.io/nucleo-quality-control/

Installation

Clone the repository:

git clone --depth 50 https://github.com/msk-access/nucleo_qc.git

Credits

• CMO cfDNA Informatics Team
• Cookiecutter: https://github.com/audreyr/cookiecutter
• audreyr/cookiecutter-pypackage: https://github.com/audreyr/cookiecutter-pypackage