duplicated entrez gene ids
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idavydov commented
Hi, first of all thanks on working on this. Very useful resource.
I noticed that some rows in RPKM files have duplcated entrez ids. E.g., in thyroid-rsem-fpkm-gtex.txt.gz there are two lines:
Hugo_Symbol Entrez_Gene_Id GTEX.Y111.1926.SM.4SOIS
1343 CSH2 1442 0
9482 CSH1 1442 0
They have identical Entrez_Gene_Id (1442, which is CSH1). However, the correct Entrez_Gene_Id for CSH2 would be 1443, not 1442. Any suggestions on where is this coming from?