mskcc/RNAseqDB

Issues

• Generating TPM values instead of FPKM values

  #14 opened 2 years ago by vittoriofortino84
  1

• about performing DEGs analysis

  #13 opened 3 years ago by yan911
  1

• Duplicated sample IDs with different expression of genes in TCGA BRCA data

  #10 opened 4 years ago by mxdeluca
  1

• ComBat failure algorithm

  #12 opened 2 years ago by csmith-pact
  0

• Comparison with non-TCGA/TARGET/GTEX samples

  #11 opened 3 years ago by BunnyBoss
  1

• Junction read counts

  #9 opened 5 years ago by rscmauer
  0

• normalized gtex data has truncated number of samples

  #8 opened 5 years ago by lianyh
  2

• quantile normalization unclear, script missing

  #7 opened 6 years ago by bzip2
  4

• extraordinary expression value after batch correction

  #6 opened 6 years ago by bzip2
  1

• duplicated entrez gene ids

  #5 opened 6 years ago by idavydov
  0

• What is the difference between the dash-t TCGA expected counts files and the non-dash-t TCGA expected counts files in

  #4 opened 7 years ago by nellore
  3

• normalized data availability

  #3 opened 7 years ago by igordot
  1

• normalized-data

  #2 opened 7 years ago by hedgehog9014
  1

• missing skcm normalized data

  #1 opened 7 years ago by crazyhottommy
  1