Pinned Repositories
CRISPResso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
TranscriptClean
Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome
genomenote
Nextflow DSL2 pipeline to generate a Genome Note, including assembly statistics, quality metrics, and Hi-C contact maps. This workflow is part of the Tree of Life production suite.
mtammami's Repositories
mtammami/CRISPResso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
mtammami/TranscriptClean
Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome