/virtual-microscope

Virtual Microscope OMERO.web extension application

Primary LanguagePythonGNU Affero General Public License v3.0AGPL-3.0

OMERO.web Virtual Microscope

Virtual Microscope OMERO.web extension application

Requirements

  • OMERO 5.1.0 or later

Installation

Clone

$ git clone git://github.com/openmicroscopy/virtual-microscope.git virtual-microscope

or download

$ wget -O master.zip https://github.com/openmicroscopy/virtual-microscope/zipball/master
$ unzip master.zip
$ mv openmicroscopy-virtual-microscope-* virtual-microscope

Add virtual-microscope to PYTHONPATH:

$ export PYTHONPATH=/path/to/virtual-microscope:$PYTHONPATH

Add virtual-microscope custom app to your installed web apps:

$ bin/omero config append omero.web.apps '"virtualmicroscope"'

NB: note that double quotes are wrapped by single quotes. Windows users will need to do

$ bin\omero config append omero.web.apps "\"virtualmicroscope\""

Redirect to post login page

$ bin/omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'

Now start up OMERO.web as normal.