/hic-pipeline

HiC uniform processing pipeline

Primary LanguageWDLMIT LicenseMIT

CircleCI

HiC uniform processing pipeline

Directories

  • backends/ : Backend configuration files (.conf)
  • workflow_opts/ : Workflow option files (.json)
  • examples/ : input JSON examples
  • docker_image/ : Dockerfile
  • nvidia_docker_image/ : Dockerfile for Nvidia Docker: to use pipeline with GPU
  • test/ : test scripts for developers

Installation and usage

See here.